Package: CTNote 0.1.3
Gabriel Odom
CTNote: CTN Outcomes, Treatments, and Endpoints
The Clinical Trials Network (CTN) of the U.S. National Institute of Drug Abuse sponsored the CTN-0094 research team to harmonize data sets from three nationally-representative clinical trials for opioid use disorder (OUD). The CTN-0094 team herein provides a coded collection of trial outcomes and endpoints used in various OUD clinical trials over the past 50 years. These coded outcome functions are used to contrast and cluster different clinical outcome functions based on daily or weekly patient urine screenings. Note that we abbreviate urine drug screen as "UDS" and urine opioid screen as "UOS". For the example data sets (based on clinical trials data harmonized by the CTN-0094 research team), UDS and UOS are largely interchangeable.
Authors:
CTNote_0.1.3.tar.gz
CTNote_0.1.3.zip(r-4.7)CTNote_0.1.3.zip(r-4.6)CTNote_0.1.3.zip(r-4.5)
CTNote_0.1.3.tgz(r-4.6-any)CTNote_0.1.3.tgz(r-4.5-any)
CTNote_0.1.3.tar.gz(r-4.7-any)CTNote_0.1.3.tar.gz(r-4.6-any)
CTNote_0.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
CTNote/json (API)
NEWS
| # Install 'CTNote' in R: |
| install.packages('CTNote', repos = c('https://ctn-0094.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ctn-0094/ctnote/issues
Pkgdown/docs site:https://ctn-0094.github.io
- egOpioidsCTN0094 - Opioid Use by Study Day for Example CTN-0094 Participants
- outcomesCTN0094 - All Treatment Outcomes for CTN-0094 Participants
Last updated from:cf421a087e. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 146 | ||
| source / vignettes | OK | 249 | ||
| linux-release-x86_64 | OK | 143 | ||
| macos-release-arm64 | OK | 148 | ||
| macos-oldrel-arm64 | OK | 156 | ||
| windows-devel | OK | 89 | ||
| windows-release | OK | 99 | ||
| windows-oldrel | OK | 92 | ||
| wasm-release | OK | 123 |
Exports:collapse_latticecount_matchesdetect_in_windowdetect_subpatternimpute_missing_visitsmeasure_abstinence_periodmeasure_retentionrecode_missing_visitsview_by_latticeweight_positive_visits
Dependencies:cligluelifecyclemagrittrrlangstringistringrvctrs
CTNote Library: Abstinence Outcomes
Rendered fromlibrary_abstinence_20220711.Rmdusingknitr::rmarkdownon May 26 2026.Last update: 2023-02-10
Started: 2022-07-11
CTNote Library: Reduction Outcomes
Rendered fromlibrary_reduction_20220630.Rmdusingknitr::rmarkdownon May 26 2026.Last update: 2022-12-16
Started: 2022-06-30
CTNote Library: Relapse Outcomes
Rendered fromlibrary_relapse_20220711.Rmdusingknitr::rmarkdownon May 26 2026.Last update: 2022-11-23
Started: 2022-07-11
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Combine Multiple Simple Study Design "Lattices" | collapse_lattice |
| Count Periods of Substance Use / Abstinence | count_matches |
| Detect Visits before Matching a Fuzzy Sub-Pattern | detect_in_window |
| Detect a Consecutive Sub-Pattern | detect_subpattern |
| Opioid Use by Study Day for Example CTN-0094 Participants | egOpioidsCTN0094 |
| Naively Impute Missing Visits | impute_missing_visits |
| Measure the Length of the Longest Abstinent Period | measure_abstinence_period |
| Measure Length of Use Pattern before Dropout | measure_retention |
| All Treatment Outcomes for CTN-0094 Participants | outcomesCTN0094 |
| Recode Missing or Ambiguous UDS in a Subject Use Pattern | recode_missing_visits |
| View a Pattern through a Study Design "Lattice" | view_by_lattice |
| Weight Visits in a Subject Use Pattern | weight_positive_visits |
